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Denolle-Lab
codameter
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P3 (part 1): sidecar provenance, --check mode, in-repo Gate 1 figure, paper workflow (S-RP.1/3/4, S-RE.5, S-FD.4/5)
- #54
#54
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P3 (part 1): sidecar provenance, --check mode, in-repo Gate 1 figure, paper workflow (S-RP.1/3/4, S-RE.5, S-FD.4/5)
#54
mdenolle
wants to merge 17 commits into
docs/sign-convention-manuscript
Denolle-Lab/codameter:docs/sign-convention-manuscript
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iter3/P3
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Commits on Sep 13, 2026
Provenance, sidecar check, in-repo Gate 1 figure and a paper workflow (#41)
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Address the Copilot review on #54: ignore untracked files in git_dirty, fix a literal tilde, soften the sidecar claim, check tildes in CI
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Sidecar check: tolerate rounding noise at entries that are zero up to arithmetic
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Regenerate the Gate 1 figure sidecar from a clean tree (git_dirty false) and the TeX
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Log the P3 part-1 execution in the iteration-3 plan record (#41)
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Sidecar check: scale the tolerance by either array (#54, Copilot review)
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Commits on Sep 14, 2026
Remove script and module names from the P3 manuscript text (#41)
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Sidecar check: relative-difference diagnostic over either array; dirty flag checks all of src/ (#41, Copilot review)
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Sidecar check: scale from each array's largest finite magnitude, no concatenated copy (#41, Copilot review)
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check_shards refuses rows without a generator digest; selector reuses the registry (#41, Copilot review)
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Paper workflow: pull requests to the manuscript branch only; honest docstring on the scale helper (#41, Copilot review)
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Git provenance helpers in a plotting-free module; quiet NaN-placement diagnostic (#41, Copilot review)
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Gate 1 generator: the rules file follows the gate1 path and its absence is a MissingInputs (#41, Copilot review)
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Cache git_commit per process; omit missing commits from the shard inventory (#41, Copilot review)
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Cache the generator digest and the dirty flag per process (#41, Copilot review)
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git_dirty: relative pathspec from the package directory (#41, Copilot review)
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Commits on Sep 15, 2026
Cache the golden generator hash per process; SOURCES.md says which real-data figures regenerate (#41, Copilot review)
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