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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 177 43

  2. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 122 49

  3. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 115 14

  4. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    SCSS 45 45

  5. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 42 5

  6. Galeano-Nino-Bullman-Intratumoral-Microbiota_2022 Galeano-Nino-Bullman-Intratumoral-Microbiota_2022 Public

    Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022

    Python 42 8

Repositories

Showing 10 of 680 repositories
  • tfcb_2026 Public

    MCB 536: Tools for Computational Biology (2026)

    FredHutch/tfcb_2026's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 1, 2026
  • DPR2 Public

    DPR2 - DataPackageR2

    FredHutch/DPR2's past year of commit activity
    R 2 0 6 3 Updated Sep 30, 2026
  • sas7bdat-specification Public Forked from BioStatMatt/sas7bdat

    A reverse engineering of the sas7bdat file format

    FredHutch/sas7bdat-specification's past year of commit activity
    Shell 3 22 0 0 Updated Sep 30, 2026
  • geoexmap Public
    FredHutch/geoexmap's past year of commit activity
    R 0 0 0 0 Updated Sep 28, 2026
  • codex-perplexity-adapter Public

    Local Responses API adapter for using Codex with the Perplexity Agent API

    FredHutch/codex-perplexity-adapter's past year of commit activity
    Python 1 MIT 0 0 3 Updated Sep 24, 2026
  • wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    FredHutch/wiki's past year of commit activity
    SCSS 45 45 67 12 Updated Sep 23, 2026
  • anvil_surveys Public

    Repository for surveydown files for various AnVIL surveys (e.g., SOTA iterations)

    FredHutch/anvil_surveys's past year of commit activity
    HTML 0 MIT 0 0 1 Updated Sep 22, 2026
  • wdl-unit-tests Public

    Collection of simple WDL's for use in unit testing of WDL-centric software such as PROOF

    FredHutch/wdl-unit-tests's past year of commit activity
    Python 1 MIT 1 21 0 Updated Sep 21, 2026
  • sas-transport Public

    A java library for reading and writing SAS transport files

    FredHutch/sas-transport's past year of commit activity
    Java 3 MIT 0 0 0 Updated Sep 17, 2026
  • sas7bdat Public

    A java library for writing SAS7BDAT datasets

    FredHutch/sas7bdat's past year of commit activity
    Java 12 MIT 1 0 0 Updated Sep 17, 2026
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