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@bbglab

BBGLab - Barcelona Biomedical Genomics Lab

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  1. intogen-plus intogen-plus Public

    a framework for automatic and comprehensive knowledge extraction based on mutational data from sequenced tumor samples from patients.

    Python 6 5

  2. boostdm-pipeline boostdm-pipeline Public

    Learning pipeline to identify somatic SNVs under positive selection.

    Python 5 1

Repositories

Showing 10 of 45 repositories
  • deepCSA Public

    Pipeline for the analysis of the clonal structure of tissues using duplex-sequencing data.

    bbglab/deepCSA's past year of commit activity
    Python 2 0 49 5 Updated Nov 4, 2026
  • deepUMIcaller Public

    A Nextflow pipeline for duplex sequencing data analysis

    bbglab/deepUMIcaller's past year of commit activity
    Nextflow 6 3 18 2 Updated Nov 2, 2026
  • DeepClone_protocol Public

    End-to-end duplex sequencing protocol to study somatic mutagenesis and selection

    bbglab/DeepClone_protocol's past year of commit activity
    HTML 0 0 0 0 Updated Oct 21, 2026
  • containers-recipes Public
    bbglab/containers-recipes's past year of commit activity
    Dockerfile 0 1 2 0 Updated Oct 14, 2026
  • openvariant Public

    Read, parse and operate different multiple input file formats with OpenVariant

    bbglab/openvariant's past year of commit activity
    Python 14 BSD-3-Clause 4 41 8 Updated Oct 7, 2026
  • gitools-web-app Public

    Browser-based genomics matrix explorer — interactive heatmap, annotations, group comparison statistics

    bbglab/gitools-web-app's past year of commit activity
    TypeScript 0 BSD-3-Clause 0 0 0 Updated Sep 25, 2026
  • bbgwiki Public

    Website with info of all the tools and data used in the bbglab

    bbglab/bbgwiki's past year of commit activity
    HTML 4 2 48 11 Updated Sep 2, 2026
  • bbgregressions Public

    Code to run linear models for association analysis

    bbglab/bbgregressions's past year of commit activity
    Python 0 0 8 3 Updated Sep 1, 2026
  • rhabdoids-genomic-evolution Public

    This repository contains the necessary code to reproduce the analysis of "Variable latency between the founder genetic event and rhabdoid tumor expansion" Sánchez-Guixé M. et al 2026 (doi: https://doi.org/10.64898/2026.06.30.735306).

    bbglab/rhabdoids-genomic-evolution's past year of commit activity
    Jupyter Notebook 0 AGPL-3.0 0 0 0 Updated Sep 1, 2026
  • cancer-detective-pro Public

    Cancer Detective activity

    bbglab/cancer-detective-pro's past year of commit activity
    HTML 0 0 0 0 Updated Aug 31, 2026
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