Issues

• verifybamid2 vs charr(like) estimates

  brentp/somalier#169 · Filter by author lmorabit7 opened on Sep 30, 2026
  1

• Error: unhandled exception: Broadcasting error: non-singleton dimensions must be the same in both tensors.

  brentp/somalier#164 · Filter by author dfermin opened on Sep 23, 2026
  3

• Feature request: Include relatedness in samples result files

  brentp/somalier#158 · Filter by author Vince-janv opened on Dec 17, 2025

• Any way to mask label assignment for low confidence ancestry preditions?

  brentp/somalier#156 · Filter by author rajwanir opened on Sep 29, 2025

• find-sites: Pop AF 0.5 as proxy for freq heterozygosity

  brentp/somalier#155 · Filter by author ckandoth opened on Sep 19, 2025
  6

• html file shows no plots

  brentp/somalier#154 · Filter by author mmartinezj opened on Aug 5, 2025
  2

• relate: fix axis in html report

  brentp/somalier#150 · Filter by author matthdsm opened on Mar 28, 2025

• Somalier relate with ONT WGS data

  brentp/somalier#146 · Filter by author MartinezRuiz-Carlos opened on Mar 4, 2025
  3

• Max number of samples?

  brentp/somalier#145 · Filter by author jjfarrell opened on Feb 19, 2025
  3

• How to build somalier?

  brentp/somalier#144 · Filter by author kpalin opened on Feb 4, 2025
  2

• get the list of ancestry sites?

  brentp/somalier#143 · Filter by author PhillipMaire opened on Dec 19, 2024
  7

• HTML Report Doesn't Record Execution Parameters

  brentp/somalier#142 · Filter by author DarioS opened on Nov 12, 2024
  1

• Inferring sex in 0.2.19

  brentp/somalier#140 · Filter by author fellen31 opened on Aug 13, 2024
  4

• (extremely minor) GRCh37 sites file has hg19 MT contig in header

  brentp/somalier#139 · Filter by author davmlaw opened on Jul 29, 2024

• Is there a way to rename samplename within .somalier files?

  brentp/somalier#138 · Filter by author SpikyClip opened on Jul 16, 2024
  2

• Somalier with pooled parents

  brentp/somalier#136 · Filter by author tetedange13 opened on May 24, 2024
  3

• chrX sites count

  brentp/somalier#133 · Filter by author AinaMontalban opened on Mar 5, 2024

• [error] SIGSEGV: Illegal storage access. (Attempt to read from nil?) Segmentation fault (core dumped) (

  brentp/somalier#131 · Filter by author egenomics opened on Dec 18, 2023
  14

• Inference questions

  brentp/somalier#129 · Filter by author solcos opened on Dec 1, 2023

• IBS1 count

  brentp/somalier#127 · Filter by author rgve opened on Nov 2, 2023

• Relatedness color pattern issue in plot

  brentp/somalier#126 · Filter by author mirgin01 opened on Nov 2, 2023
  6

• How sex is inferred

  brentp/somalier#124 · Filter by author solcos opened on Oct 2, 2023
  1

• SIGSEGV: Illegal storage access. (Attempt to read from nil?)

  brentp/somalier#120 · Filter by author pamelaxu213 opened on Aug 21, 2023
  2

• Re-use of inferred parent names in large families

  brentp/somalier#119 · Filter by author Awtum opened on Aug 9, 2023
  1

• No pedigree inference in samples from same family

  brentp/somalier#114 · Filter by author mjlarsen opened on Jun 7, 2023
  1