chore: Update the Galaxy wrappers - #1465
Merged
Merged
Conversation
Updated requirements to include Docker container for deepTools.
Replaced Docker container requirement with package requirement for deeptools.
…ry, plotCoverage, plotFingerprint and plotEnrichment
…erOfSamples params
pavanvidem
commented
Sep 11, 2026
| @@ -5,8 +5,7 @@ | |||
| <token name="@GALAXY_VERSION@">23.2</token> | |||
Collaborator
Author
There was a problem hiding this comment.
@bgruening should I update this to 25.0?
@WardDeb do you know whether there is an MPI Galaxy server that uses an older version?
Member
There was a problem hiding this comment.
the MPI one will (likely) be refactored to an up-to-date version, so no need to keep this in mind here
Collaborator
Author
There was a problem hiding this comment.
It is the version of the Galaxy instance. If we increase it to 25.0 and the MPI is still using an older version, then these tools cannot be installed. Maybe it is a good idea not to touch it now :)
Collaborator
Author
|
It is ready |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Updated requirements to include Docker container for deepTools.
Welcome to deepTools GitHub repository! Please check the following regarding
your pull request :
(e.g.
feat: ...,fix: ...)? This PR is squash-merged using the title as thecommit summary, which release-please parses to determine the next version and
changelog entry — see CONTRIBUTING.md.